The agency advised motorists to drive with caution, especially in the extreme northern parts where reduction in visibility is envisaged.
The Nigerian Meteorological Agency (NiMet) has forecast three days of cloudiness and thunderstorms across the country.
The government said the charge becomes necessary as Nigeria hydrological agency has warned of possible flooding in the state.
The FCT Emergency Management Agency has urged Abuja residents to stay alert to predictions issued by the Nigeria Meteorological Agency (NiMet).
The flooding disaster spanned through eight local government councils of Kano.
The Nigeria Meteorological Agency has warned of heavy rainfall with massive floods that will affect some states and parts of Yobe.
The Kano SEMA boss advised those living close to rivers and ponds to vacate the area for one to two months.