The police boss named Ojiyovwi Miracle, Goodluck Ovuijeddo, Dennis Uvietesivwi, Ransome Monday and Hilda Ejohwemu as 1st to 5th defendants respectively.
Mr El-Rufai is scheduled to take his plea before Justice Joyce Abdulmalik in the court on a three-count charge.
Mr Sowore is facing a five-count charge.
Mr Fagbemi, who signed the agreement, said the initiative was a transformative stride by the government to end cybercrimes in the country.
The force spokesperson urged Nigerians to stand united against the spread of misinformation and cyberbullying.
