The decision to cancel the contract was made in the last days of the administration of former President Rodrigo Duterte due to fears of U.S. sanctions.
Mr Duterte ordered the Philippines’ withdrawal from the ICC in March 2018.
The patient’s 10 close contacts have been tracked down and are asymptomatic.
The Philippines is located on the Pacific Ring of Fire, where about 90 per cent of the world’s earthquakes occur.
President Ferdinand Marcos of the Philippines on Friday swore in career diplomat Luis Manalo as the country’s new foreign secretary on Friday.
Over 920,000 people were affected by the first storm to hit the Philippines this year, triggering massive landslides and floods that killed 123.
His father’s rule was also marked by excessive spending, led by former first lady Imelda Marcos notorious for amassing 3,000 pairs of shoes.
The Philippines and China are embroiled in a territorial dispute due to overlapping claims in the South China Sea.
The Philippines also has a mutual defence treaty with the U.S., which binds the two allies to come to each other’s aid in cases of aggression.
The “no vaccination, no ride/no entry” policy would be in effect in the capital region of Metro Manila, a sprawling metropolis of more than 13 million people.